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Update MANIFEST.json to newest version.

Background: Recently in web-platform-tests the format of MANIFEST.json changed, and I filed http://crbug.com/678077 for this. I committed a change http://crrev.com/2610243002 which updated the layout test runner to find web-platform-tests with the new manifest format, but the actual manifest file was too large to upload to Rietveld and was not committed. After that change, no wpt tests are found when running run-webkit-tests imported/wpt.

This change would update MANIFEST.json, although the actual file is still too large to upload to Rietveld, so this CL (in patch 1 at least) appears empty. I believe it would have to be landed directly.

TBR=dpranke

BUG=678077

Review-Url: https://codereview.chromium.org/2615903004 .
Cr-Commit-Position: refs/heads/master@{#441999}